brainprep.workflow: Available workflows.

Available workflows.

Functions

brainprep_defacing(t1_file, output_dir[, ...])

Defacing pre-processing workflow for anatomical T1-weighted images.

brainprep_fmriprep(t1_file, func_files, ...)

Subject level functional MRI pre-processing.

brainprep_group_defacing(output_dir[, ...])

Group level defacing pre-processing.

brainprep_group_fmriprep(output_dir[, ...])

Group level functional MRI pre-processing.

brainprep_group_quality_assurance(...[, ...])

Group-level quality assurance pre-processing.

brainprep_group_quasiraw(output_dir[, ...])

Group level Quasi-RAW pre-processing.

brainprep_group_sbm(output_dir[, ...])

Group level SBM pre-processing.

brainprep_group_vbm(output_dir[, ...])

Group-level VBM pre-processing.

brainprep_longitudinal_sbm(t1_files, output_dir)

Longitudinal SBM preprocessing.

brainprep_longitudinal_vbm(t1_files, model, ...)

Longitudinal voxel based morphometry (VBM) pre-processing.

brainprep_quality_assurance(image_files, ...)

Subject level quality assurance pre-processing workflow for MRI images.

brainprep_quasiraw(anatomical_file, output_dir)

Quasi-RAW pre-processing.

brainprep_sbm(t1_file, output_dir[, ...])

SBM pre-processing.

brainprep_vbm(t1_file, output_dir[, ...])

Voxel-based morphometry (VBM) pre-processing.