Note

This page is a reference documentation. It only explains the function signature, and not how to use it. Please refer to the user guide for the big picture.

brainprep.interfaces.mriqc.group_level_qa

brainprep.interfaces.mriqc.group_level_qa(modalities, output_dir)

Compute group level Image Quality Metrics (IQMs) generated by MRIQC.

Parameters:

modalities: list[str]

The modalities in the current study.

output_dirDirectory

Directory where the IQMs will be saved.

Returns:

commandlist[str]

Group quality analysis command-line.

outputstuple[File | list[File]]

• iqm_files : list[File] - Group IQM files.