User guide

This user guide is especially directed towards grad students with a background in computer science. However, less or more advanced readers can also find interesting pieces of information throughout the guide.

• 1. Data Organization Ontology
• 2. Wrappers for Interface Construction
• 3. Command Line Interface
• 4. Quality Assurance Workflow
• 5. Defacing Workflow
• 6. QuasiRAW Workflow
• 7. Voxel Based Morphometry Workflow
• 8. Surface-Based Morphometry Workflow
• 9. fMRI Pre-Processing Workflow
• 10. Reporting Workflow
• 11. Glossary
• 12. Software Used